BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E02SP1|AL425701
(595 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1674 1086 0.0
>3x_Contig1674
Length = 12281
Score = 1086 bits (548), Expect = 0.0
Identities = 584/595 (98%), Gaps = 1/595 (0%)
Strand = Plus / Minus
Query: 1 gatctaggttcattcatttcacgtattgtactattataacttttgaagcccaagttcgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7909 gatctaggttcattcatttcacgtattgtactattataacttttgaagcccaagttcgaa 7850
Query: 61 acagaaccatgtcctcccttactttttggcgcgacgtctaaaagcatccttaaagaagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7849 acagaaccatgtcctcccttactttttggcgcgacgtctaaaagcatccttaaagaagtg 7790
Query: 121 tccattggatcctcatcactagtccatggctttccagttgcgatatctcgtgcatgttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7789 tccattggatcctcatcactagtccatggctttccagttgcgatatctcgtgcatgttta 7730
Query: 181 ttcatattgttatgtccgtcagtaatagaaagctccgccttgtacttatccttgaaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7729 ttcatattgttatgtccgtcagtaatagaaagctccgccttgtacttatccttgaaacta 7670
Query: 241 atatcatctagatctttgtatatcgcgttgatatccctactcttgccatttgaaccgtgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7669 atatcatctagatctttgtatatcgcgttgatatccctactcttgccatttgaaccgtgg 7610
Query: 301 ctgatcttcatcaatggatcattctgatcgatagtattgctctctaacaaatcctgtaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7609 ctgatcttcatcaatggatcattctgatcgatagtattgctctctaacaaatcctgtaac 7550
Query: 361 cgtcttttcatatatcccccatcattactataatataatcgttgtactgatctttttatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7549 cgtcttttcatatatcccccatcattactataatataatcgttgtactgatctttttatt 7490
Query: 421 acaggtctcattcccaatccatagttgagtagtgcggagagcgttcaataatatctcggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7489 acaggtctcattcccaatccatagttgagtagtgcggagagcgttcaataatatctcggc 7430
Query: 481 gtgcctgtttgaagttttttgagggaaatgtggcacaatatggaaagtattcggtatggg 540
|||||||||||||||||||| |||||||||| |||||||||| |||||||||||||| ||
Sbjct: 7429 gtgcctgtttgaagtttttttagggaaatgttgcacaatatgtaaagtattcggtattgg 7370
Query: 541 aaggggcagcatttttaaggatttgggatatgcttncaaatttaacaaaaaccga 595
|||| ||||||||||||||||||| | || ||| |||||||||||||||||||
Sbjct: 7369 aaggttcagcatttttaaggatttgttagat-ctttcaaatttaacaaaaaccga 7316
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4053
Number of Sequences: 1807
Number of extensions: 4053
Number of successful extensions: 81
Number of sequences better than 1.0e-20: 1
length of query: 595
length of database: 10,358,551
effective HSP length: 16
effective length of query: 579
effective length of database: 10,329,639
effective search space: 5980860981
effective search space used: 5980860981
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)